Transcript: SAPCD1-AS1:2

Basic information

LNCipedia transcript ID: SAPCD1-AS1:2 
LNCipedia gene ID: SAPCD1-AS1
Location (hg38): chr6:31764136-31765588
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 635 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_126423
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -277.4079 non-coding 
CPAT coding probability 9.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SAPCD1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VWA7-1:2
4.0 SAPCD1-AS1:2
4.1 SAPCD1-AS1:2
5.0 SAPCD1-AS1:2
5.1 SAPCD1-AS1:2
5.2 SAPCD1-AS1:2