Transcript: RSF1-IT2:1

Basic information

LNCipedia transcript ID: RSF1-IT2:1 
HGNC Gene Symbol: RSF1-IT2    
HGNC Full Gene Name: RSF1 intronic transcript 2
Ensembl Gene ID: ENSG00000254985
Ensembl Transcript ID: ENST00000529656
Location (hg38): chr11:77717712-77718411
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 566 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000529656.1; RSF1-IT2-001; OTTHUMT00000391069.1; NONHSAT023230
Alternative gene names: ENSG00000254985.1; RSF1-IT2; OTTHUMG00000166669.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.1066 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RSF1-IT2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLNS1A-1:1
4.0 RSF1-IT2:1
4.1 RSF1-IT2:1
5.0 RSF1-IT2:1
5.1 RSF1-IT2:1
5.2 RSF1-IT2:1