Transcript: RRS1-AS1:1

Basic information

LNCipedia transcript ID: RRS1-AS1:1 
HGNC Gene Symbol: RRS1-AS1    
HGNC Full Gene Name: RRS1 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000246145
Ensembl Transcript ID: ENST00000499642
Location (hg38): chr8:66419589-66428977
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 4366 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00014558; ENST00000499642; ENST00000499642.1; RP11-346I3.4-001; OTTHUMT00000381156.1
Alternative gene names: XLOC_007111; linc-CRH-3; ENSG00000246145; RP11-346I3.4; ENSG00000246145.1; OTTHUMG00000164956.1; RRS1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.7431 non-coding 
CPAT coding probability 10.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RRS1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MYBL1-1:1
3.1 lnc-MYBL1-1:1
4.0 RRS1-AS1:1
4.1 RRS1-AS1:1
5.0 RRS1-AS1:1
5.1 RRS1-AS1:1
5.2 RRS1-AS1:1