Transcript: RORB-AS1:4

Basic information

LNCipedia transcript ID: RORB-AS1:4 
LNCipedia gene ID: RORB-AS1
Location (hg38): chr9:74473376-74477753
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 299 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016361; NONHSAT131919
Alternative gene names: XLOC_007740; linc-ALDH1A1-7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.1307 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RORB-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRPM6-1:1
3.1 lnc-TRPM6-2:1
4.0 RORB-AS1:4
4.1 RORB-AS1:4
5.0 RORB-AS1:4
5.1 RORB-AS1:4
5.2 RORB-AS1:4