Transcript: RORA-AS2:5

Basic information

LNCipedia transcript ID: RORA-AS2:5 
LNCipedia gene ID: RORA-AS2
Location (hg38): chr15:60682199-60687294
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 803 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT044232
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.5884 non-coding 
CPAT coding probability 5.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RORA-AS2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXB1-4:3
4.0 RORA-AS2:5
4.1 RORA-AS2:5
5.0 RORA-AS2:5
5.1 RORA-AS2:5
5.2 RORA-AS2:5