Transcript: ROR1-AS1:6

Basic information

LNCipedia transcript ID: ROR1-AS1:6 
LNCipedia gene ID: ROR1-AS1
RefSeq ID: NR_110665
Location (hg38): chr1:64105322-64113791
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2100 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110665.1
Alternative gene names: ROR1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.7661 non-coding 
CPAT coding probability 69.76% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ROR1-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 ROR1-AS1:6
5.1 ROR1-AS1:6
5.2 ROR1-AS1:6