Transcript: RNASEH2B-AS1:10

Basic information

LNCipedia transcript ID: RNASEH2B-AS1:10 
HGNC Gene Symbol: RNASEH2B-AS1    
HGNC Full Gene Name: RNASEH2B antisense RNA 1
Ensembl Gene ID: ENSG00000233672
Ensembl Transcript ID: ENST00000593369
Location (hg38): chr13:50882464-50891642
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 648 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT033872; ENST00000593369.1; ENST00000593369.5
Alternative gene names: ENSG00000233672.2; RNASEH2B-AS1; ENSG00000233672.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0857 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNASEH2B-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLEU7-1:7
4.0 RNASEH2B-AS1:10
4.1 RNASEH2B-AS1:10
5.0 RNASEH2B-AS1:10
5.1 RNASEH2B-AS1:10
5.2 RNASEH2B-AS1:10