Transcript: RMDN2-AS1:4

Basic information

LNCipedia transcript ID: RMDN2-AS1:4 
LNCipedia gene ID: RMDN2-AS1
RefSeq ID: NR_102712
Location (hg38): chr2:37950334-38036341
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 526 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000414365.1; AC016689.1-001; OTTHUMT00000326859.1; NR_102712; NR_102712.1
Alternative gene names: ENSG00000235848.1; AC016689.1; OTTHUMG00000152578.1; ; RMDN2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.8438 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RMDN2-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYP1B1-2:1
4.0 RMDN2-AS1:4
4.1 RMDN2-AS1:4
5.0 RMDN2-AS1:4
5.1 RMDN2-AS1:4
5.2 RMDN2-AS1:4