Transcript: RFX3-AS1:4

Basic information

LNCipedia transcript ID: RFX3-AS1:4 
LNCipedia gene ID: RFX3-AS1
Location (hg38): chr9:3528234-3546863
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 575 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT130024
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.2338 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RFX3-AS1:4 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNV2-3:5
4.0 RFX3-AS1:4
4.1 RFX3-AS1:4
5.0 RFX3-AS1:4
5.1 RFX3-AS1:4
5.2 RFX3-AS1:4