Transcript: RDH10-AS1:3

Basic information

LNCipedia transcript ID: RDH10-AS1:3 
HGNC Gene Symbol: RDH10-AS1    
HGNC Full Gene Name: RDH10 antisense RNA 1
Ensembl Gene ID: ENSG00000250295
Ensembl Transcript ID: ENST00000520894
Location (hg38): chr8:73297711-73315609
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 430 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000520894.1; RP11-434I12.2-002; OTTHUMT00000378987.1; NONHSAT127240
Alternative gene names: ENSG00000250295.2; RP11-434I12.2; OTTHUMG00000164493.1; ENSG00000250295.6; RDH10-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.4549 non-coding 
CPAT coding probability 4.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RDH10-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL7-1:3
4.0 RDH10-AS1:3
4.1 RDH10-AS1:3
5.0 RDH10-AS1:3
5.1 RDH10-AS1:3
5.2 RDH10-AS1:3