Transcript: RBMS3-AS3:1

Basic information

LNCipedia transcript ID: RBMS3-AS3:1 
HGNC Gene Symbol: RBMS3-AS3    
HGNC Full Gene Name: RBMS3 antisense RNA 3
Ensembl Gene ID: ENSG00000235904
Ensembl Transcript ID: ENST00000413430
Location (hg38): chr3:29264194-29290726
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 613 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413430.1; RBMS3-AS3-001; OTTHUMT00000341279.1; NONHSAT088799
Alternative gene names: ENSG00000235904.1; RBMS3-AS3; OTTHUMG00000155693.1; ; ENSG00000235904.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.0018 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RBMS3-AS3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AZI2-2:1
4.0 RBMS3-AS3:1
4.1 RBMS3-AS3:1
5.0 RBMS3-AS3:1
5.1 RBMS3-AS3:1
5.2 RBMS3-AS3:1