Transcript: RASGRF2-AS1:6

Basic information

LNCipedia transcript ID: RASGRF2-AS1:6 
LNCipedia gene ID: RASGRF2-AS1
Location (hg38): chr5:80948279-80950200
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT102427
Alternative gene names: ; CTC-459I6.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3941 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RASGRF2-AS1:6 no no no no

Available literature

  1. Singh (2016), Investigation of novel LPS-induced differentially expressed long non-coding RNAs in endothelial cells., Mol. Cell. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHFR-2:8
4.0 RASGRF2-AS1:6
4.1 RASGRF2-AS1:6
5.0 RASGRF2-AS1:6
5.1 RASGRF2-AS1:6
5.2 RASGRF2-AS1:6