Transcript: RARA-AS1:4

Basic information

LNCipedia transcript ID: RARA-AS1:4 
LNCipedia gene ID: RARA-AS1
Location (hg38): chr17:40340972-40342811
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1545 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT053540
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -215.766 non-coding 
CPAT coding probability 6.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RARA-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GJD3-1:4
4.0 RARA-AS1:4
4.1 RARA-AS1:4
5.0 RARA-AS1:4
5.1 RARA-AS1:4
5.2 RARA-AS1:4