Transcript: RAP2C-AS1:8

Basic information

LNCipedia transcript ID: RAP2C-AS1:8 
LNCipedia gene ID: RAP2C-AS1
Location (hg38): chrX:132218232-132430284
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1078 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232160.2|FTMT29100008642.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.0776 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RAP2C-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RAP2C-AS1:8
5.0 RAP2C-AS1:8
5.1 RAP2C-AS1:8
5.2 RAP2C-AS1:8