Transcript: RAMP2-AS1:22

Basic information

LNCipedia transcript ID: RAMP2-AS1:22 
LNCipedia gene ID: RAMP2-AS1
Location (hg38): chr17:42752880-42753799
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 264 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT053758
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 64.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
RAMP2-AS1:22 no no no no

Available literature

  1. Liu (2016), The Potential Roles of Long Noncoding RNAs (lncRNA) in Glioblastoma Development., Mol. Cancer Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMGN2P42-1:2
4.0 lnc-HMGN2P42-1:2
4.1 RAMP2-AS1:22
5.0 RAMP2-AS1:22
5.1 RAMP2-AS1:22
5.2 RAMP2-AS1:22