Transcript: RALY-AS1:8

Basic information

LNCipedia transcript ID: RALY-AS1:8 
HGNC Gene Symbol: RALY-AS1    
HGNC Full Gene Name: RALY antisense RNA 1
Ensembl Gene ID: ENSG00000285230
Ensembl Transcript ID: ENST00000432859
Location (hg38): chr20:33983052-33993124
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 610 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000432859; ENST00000432859.1; RP5-1125A11.1-003; OTTHUMT00000078748.1; NONHSAT079413
Alternative gene names: ENSG00000228265; RP5-1125A11.1; ENSG00000228265.1; OTTHUMG00000032279.1; ENSG00000228265.5; RALY-AS1; ; ENSG00000285230.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.7939 non-coding 
CPAT coding probability 4.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RALY-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EIF2S2-3:3
3.1 lnc-EIF2S2-3:3
4.0 RALY-AS1:8
4.1 RALY-AS1:8
5.0 RALY-AS1:8
5.1 RALY-AS1:8
5.2 RALY-AS1:8