Transcript: RALY-AS1:2

Basic information

LNCipedia transcript ID: RALY-AS1:2 
LNCipedia gene ID: RALY-AS1
RefSeq ID: NR_109886
Location (hg38): chr20:33992488-33994367
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 581 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109886; NR_109886.1
Alternative gene names: ; RALY-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.7769 non-coding 
CPAT coding probability 2.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RALY-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF2S2-2:2
4.0 RALY-AS1:2
4.1 RALY-AS1:2
5.0 RALY-AS1:2
5.1 RALY-AS1:2
5.2 RALY-AS1:2