Transcript: RALY-AS1:11

Basic information

LNCipedia transcript ID: RALY-AS1:11 
LNCipedia gene ID: RALY-AS1
Location (hg38): chr20:33985617-33988989
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3373 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000618285.1
Alternative gene names: ENSG00000276073.1; RP5-1125A11.7; ; AL034549.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.1477 non-coding 
CPAT coding probability 75.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
RALY-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 RALY-AS1:11
4.1 RALY-AS1:11
5.0 RALY-AS1:11
5.1 RALY-AS1:11
5.2 RALY-AS1:11