Transcript: PTOV1-AS2:3

Basic information

LNCipedia transcript ID: PTOV1-AS2:3 
LNCipedia gene ID: PTOV1-AS2
RefSeq ID: NR_110730
Location (hg38): chr19:49856465-49859289
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1101 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110730; NR_110730.1
Alternative gene names: ; PTOV1-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.447 non-coding 
CPAT coding probability 26.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PTOV1-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PNKP-6:5
4.0 PTOV1-AS2:3
4.1 PTOV1-AS2:3
5.0 PTOV1-AS2:3
5.1 PTOV1-AS2:3
5.2 PTOV1-AS2:3