Transcript: PRR7-AS1:3

Basic information

LNCipedia transcript ID: PRR7-AS1:3 
LNCipedia gene ID: PRR7-AS1
Location (hg38): chr5:177445984-177447790
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 508 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105419
Alternative gene names:

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -169.5111 non-coding 
CPAT coding probability 9.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PRR7-AS1:3 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DBN1-2:7
4.0 PRR7-AS1:3
4.1 PRR7-AS1:3
5.0 PRR7-AS1:3
5.1 PRR7-AS1:3
5.2 PRR7-AS1:3