Transcript: PROSER2-AS1:4

Basic information

LNCipedia transcript ID: PROSER2-AS1:4 
HGNC Gene Symbol: PROSER2-AS1    
HGNC Full Gene Name: PROSER2 antisense RNA 1
Ensembl Gene ID: ENSG00000225778
Ensembl Transcript ID: ENST00000453242
Location (hg38): chr10:11857289-11874795
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 475 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000453242.1; RP11-401F24.4-002; OTTHUMT00000046770.1; NONHSAT011431
Alternative gene names: ENSG00000225778.1; RP11-401F24.4; OTTHUMG00000017674.1; PROSER2-AS1; ENSG00000225778.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.8115 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROSER2-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UPF2-2:2
4.0 PROSER2-AS1:4
4.1 PROSER2-AS1:4
5.0 PROSER2-AS1:4
5.1 PROSER2-AS1:4
5.2 PROSER2-AS1:4