Transcript: PROSER2-AS1:2

Basic information

LNCipedia transcript ID: PROSER2-AS1:2 
LNCipedia gene ID: PROSER2-AS1
Location (hg38): chr10:11849613-11894700
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3141 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000445498.1; RP11-401F24.4-001; OTTHUMT00000046769.1
Alternative gene names: ENSG00000225778.1; RP11-401F24.4; OTTHUMG00000017674.1; PROSER2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.8444 non-coding 
CPAT coding probability 38.43% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PROSER2-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UPF2-2:1
4.0 PROSER2-AS1:2
4.1 PROSER2-AS1:2
5.0 PROSER2-AS1:2
5.1 PROSER2-AS1:2
5.2 PROSER2-AS1:2