Transcript: PRKX-AS1:2

Basic information

LNCipedia transcript ID: PRKX-AS1:2 
LNCipedia gene ID: PRKX-AS1
Location (hg38): chrX:3659487-3668190
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 514 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046643
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.3574 non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PRKX-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXorf28-2:2
4.0 PRKX-AS1:2
4.1 PRKX-AS1:2
5.0 PRKX-AS1:2
5.1 PRKX-AS1:2
5.2 PRKX-AS1:2