Transcript: PRICKLE2-AS2:2

Basic information

LNCipedia transcript ID: PRICKLE2-AS2:2 
LNCipedia gene ID: PRICKLE2-AS2
RefSeq ID: NR_046701
Location (hg38): chr3:64103470-64106358
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 798 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT090233; NR_046701; NR_046701.1
Alternative gene names: ; PRICKLE2-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.5371 non-coding 
CPAT coding probability 3.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PRICKLE2-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATXN7-4:2
4.0 PRICKLE2-AS2:2
4.1 PRICKLE2-AS2:2
5.0 PRICKLE2-AS2:2
5.1 PRICKLE2-AS2:2
5.2 PRICKLE2-AS2:2