Transcript: POT1-AS1:3

Basic information

LNCipedia transcript ID: POT1-AS1:3 
LNCipedia gene ID: POT1-AS1
Location (hg38): chr7:124929873-125145233
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3967 bp
Exons: 11
Sources: Refseq - Dec 2014
Alternative transcript names: NR_125718
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -36.6472 non-coding 
CPAT coding probability 9.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POT1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPAM1-4:11
4.0 POT1-AS1:3
4.1 POT1-AS1:3
5.0 POT1-AS1:3
5.1 POT1-AS1:3
5.2 POT1-AS1:3