Transcript: PLCL2-AS1:2

Basic information

LNCipedia transcript ID: PLCL2-AS1:2 
HGNC Gene Symbol: PLCL2-AS1    
HGNC Full Gene Name: PLCL2 antisense RNA 1
Ensembl Gene ID: ENSG00000226441
Ensembl Transcript ID: ENST00000414844
Location (hg38): chr3:17042742-17044192
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 311 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT088537; ENST00000414844.2
Alternative gene names: ENSG00000226441.2; PLCL2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -271.6282 non-coding 
CPAT coding probability 2.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCL2-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBC1D5-1:2
4.0 PLCL2-AS1:2
4.1 PLCL2-AS1:2
5.0 PLCL2-AS1:2
5.1 PLCL2-AS1:2
5.2 PLCL2-AS1:2