Transcript: PLCL2-AS1:1

Basic information

LNCipedia transcript ID: PLCL2-AS1:1 
LNCipedia gene ID: PLCL2-AS1
Location (hg38): chr3:17042776-17044192
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 277 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000414844.1; PLCL2-AS1-001; OTTHUMT00000340248.1
Alternative gene names: ENSG00000226441.1; PLCL2-AS1; OTTHUMG00000155466.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -271.6282 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCL2-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBC1D5-1:1
4.0 PLCL2-AS1:1
4.1 PLCL2-AS1:1
5.0 PLCL2-AS1:1
5.1 PLCL2-AS1:1
5.2 PLCL2-AS1:1