Transcript: PLCG1-AS1:4

Basic information

LNCipedia transcript ID: PLCG1-AS1:4 
LNCipedia gene ID: PLCG1-AS1
Location (hg38): chr20:41135186-41136433
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 839 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028390; NONHSAT079758
Alternative gene names: XLOC_013744; linc-MAFB-2; TOP1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.019 non-coding 
CPAT coding probability 4.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCG1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZHX3-1:1
3.1 lnc-ZHX3-1:2
4.0 PLCG1-AS1:4
4.1 PLCG1-AS1:4
5.0 PLCG1-AS1:4
5.1 PLCG1-AS1:4
5.2 PLCG1-AS1:4