Transcript: PHACTR2-AS1:2

Basic information

LNCipedia transcript ID: PHACTR2-AS1:2 
LNCipedia gene ID: PHACTR2-AS1
Location (hg38): chr6:143554330-143569339
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1514 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT115361
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.4834 non-coding 
CPAT coding probability 31.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PHACTR2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FUCA2-1:4
4.0 PHACTR2-AS1:2
4.1 PHACTR2-AS1:2
5.0 PHACTR2-AS1:2
5.1 PHACTR2-AS1:2
5.2 PHACTR2-AS1:2