Transcript: PAXBP1-AS1:1

Basic information

LNCipedia transcript ID: PAXBP1-AS1:1 
LNCipedia gene ID: PAXBP1-AS1
Location (hg38): chr21:32728106-32733898
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3173 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT081740
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.9905 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PAXBP1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf49-1:4
4.0 PAXBP1-AS1:1
4.1 PAXBP1-AS1:1
5.0 PAXBP1-AS1:1
5.1 PAXBP1-AS1:1
5.2 PAXBP1-AS1:1