Transcript: PARD6G-AS1:3

Basic information

LNCipedia transcript ID: PARD6G-AS1:3 
LNCipedia gene ID: PARD6G-AS1
RefSeq ID: NR_028340
Location (hg38): chr18:80147924-80178432
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 734 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_028340; NR_028340.1
Alternative gene names: ; PARD6G-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.4102 non-coding 
CPAT coding probability 9.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PARD6G-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADNP2-1:3
4.0 PARD6G-AS1:3
4.1 PARD6G-AS1:3
5.0 PARD6G-AS1:3
5.1 PARD6G-AS1:3
5.2 PARD6G-AS1:3