Transcript: OR2A1-AS1:20

Basic information

LNCipedia transcript ID: OR2A1-AS1:20 
LNCipedia gene ID: OR2A1-AS1
Location (hg38): chr7:144250671-144251603
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 933 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000496731
Alternative gene names: ENSG00000170356; OR2A20P;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 946.7797 coding 
CPAT coding probability 98.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
OR2A1-AS1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NOBOX-1:19
3.1 lnc-ARHGEF35-1:19
4.0 OR2A1-AS1:20
4.1 OR2A1-AS1:20
5.0 OR2A1-AS1:20
5.1 OR2A1-AS1:20
5.2 OR2A1-AS1:20