Transcript: OR2A1-AS1:12

Basic information

LNCipedia transcript ID: OR2A1-AS1:12 
HGNC Gene Symbol: OR2A1-AS1    
HGNC Full Gene Name: OR2A1 antisense RNA 1
Ensembl Gene ID: ENSG00000244479
Ensembl Transcript ID: ENST00000470435
Location (hg38): chr7:144343171-144355219
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 602 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000470435; ENST00000470435.1; RP4-798C17.6-010; OTTHUMT00000350087.1; NONHSAT123923; ENST00000470435.5
Alternative gene names: ENSG00000244479; RP4-798C17.6; ENSG00000244479.2; OTTHUMG00000158050.1; OR2A1-AS1; ENSG00000244479.6; ; ENSG00000244479.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.1645 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
OR2A1-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NOBOX-1:11
3.1 lnc-ARHGEF35-1:11
4.0 OR2A1-AS1:12
4.1 OR2A1-AS1:12
5.0 OR2A1-AS1:12
5.1 OR2A1-AS1:12
5.2 OR2A1-AS1:12