Transcript: NUP50-DT:33

Basic information

LNCipedia transcript ID: NUP50-DT:33 
LNCipedia gene ID: NUP50-DT
Location (hg38): chr22:45133821-45163840
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1246 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA949:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 71.937 coding 
CPAT coding probability 28.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NUP50-DT:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 NUP50-AS1:5
4.1 NUP50-AS1:5
5.0 NUP50-AS1:5
5.1 NUP50-DT:6
5.2 NUP50-DT:33