Transcript: NUCB1-AS1:1

Basic information

LNCipedia transcript ID: NUCB1-AS1:1 
HGNC Gene Symbol: NUCB1-AS1    
HGNC Full Gene Name: NUCB1 antisense RNA 1
Ensembl Gene ID: ENSG00000235191
Ensembl Transcript ID: ENST00000416432
RefSeq ID: NR_046633
Location (hg38): chr19:48910930-48918891
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 433 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000416432.1; NUCB1-AS1-001; OTTHUMT00000326601.1; NONHSAT067122; NR_046633; NR_046633.1
Alternative gene names: ENSG00000235191.1; NUCB1-AS1; OTTHUMG00000152526.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.9011 non-coding 
CPAT coding probability 13.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NUCB1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TULP2-1:1
4.0 NUCB1-AS1:1
4.1 NUCB1-AS1:1
5.0 NUCB1-AS1:1
5.1 NUCB1-AS1:1
5.2 NUCB1-AS1:1