Transcript: NR2F2-AS1:7

Basic information

LNCipedia transcript ID: NR2F2-AS1:7 
HGNC Gene Symbol: NR2F2-AS1    
HGNC Full Gene Name: NR2F2 antisense RNA 1
Ensembl Gene ID: ENSG00000247809
Ensembl Transcript ID: ENST00000560010
Location (hg38): chr15:96290445-96327327
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 468 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000560010.1; RP11-327J17.3-004; OTTHUMT00000415471.1
Alternative gene names: ENSG00000247809.3; RP11-327J17.3; OTTHUMG00000171855.4; NR2F2-AS1; ENSG00000247809.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -509.779 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NR2F2-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC016251.1-1:5
4.0 NR2F2-AS1:7
4.1 NR2F2-AS1:7
5.0 NR2F2-AS1:7
5.1 NR2F2-AS1:7
5.2 NR2F2-AS1:7