Transcript: NLGN1-AS1:2

Basic information

LNCipedia transcript ID: NLGN1-AS1:2 
LNCipedia gene ID: NLGN1-AS1
Location (hg38): chr3:173910499-173920796
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 814 bp
Exons: 4
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046664
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -240.996 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NLGN1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPATA16-1:3
4.0 NLGN1-AS1:2
4.1 NLGN1-AS1:2
5.0 NLGN1-AS1:2
5.1 NLGN1-AS1:2
5.2 NLGN1-AS1:2