Transcript: NDST1-AS1:7

Basic information

LNCipedia transcript ID: NDST1-AS1:7 
LNCipedia gene ID: NDST1-AS1
Location (hg38): chr5:150475531-150486185
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 585 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254333.1|ENST00000519040.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -202.1254 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NDST1-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPS14-1:5
5.0 lnc-RPS14-1:5
5.1 NDST1-AS1:2
5.2 NDST1-AS1:7