Transcript: NCK1-DT:24

Basic information

LNCipedia transcript ID: NCK1-DT:24 
LNCipedia gene ID: NCK1-DT
Location (hg38): chr3:136861630-136862059
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 430 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT092292
Alternative gene names: SLC35G2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -397.8792 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NCK1-DT:24 no no no no

Available literature

  1. Li (2018), LncRNA NCK1-AS1 promotes proliferation and induces cell cycle progression by crosstalk NCK1-AS1/miR-6857/CDK1 pathway., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STAG1-1:7
4.0 NCK1-AS1:5
4.1 NCK1-AS1:5
5.0 NCK1-AS1:5
5.1 NCK1-DT:6
5.2 NCK1-DT:24