Transcript: MKX-AS1:3

Basic information

LNCipedia transcript ID: MKX-AS1:3 
HGNC Gene Symbol: MKX-AS1    
HGNC Full Gene Name: MKX antisense RNA 1
Ensembl Gene ID: ENSG00000230500
Ensembl Transcript ID: ENST00000412244
Location (hg38): chr10:27761589-27767793
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 745 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000412244.1; RP11-360I20.2-002; OTTHUMT00000047335.1; NONHSAT011912
Alternative gene names: ENSG00000230500.1; RP11-360I20.2; OTTHUMG00000017863.1; MKX-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.5243 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MKX-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB18-1:2
4.0 MKX-AS1:3
4.1 MKX-AS1:3
5.0 MKX-AS1:3
5.1 MKX-AS1:3
5.2 MKX-AS1:3