Transcript: MKX-AS1:1

Basic information

LNCipedia transcript ID: MKX-AS1:1 
LNCipedia gene ID: MKX-AS1
RefSeq ID: NR_121652
Location (hg38): chr10:27744615-27767799
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 776 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121652; NR_121652.1
Alternative gene names: ; MKX-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -158.5243 non-coding 
CPAT coding probability 2.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MKX-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB18-1:4
4.0 MKX-AS1:1
4.1 MKX-AS1:1
5.0 MKX-AS1:1
5.1 MKX-AS1:1
5.2 MKX-AS1:1