Transcript: MIR99AHG:129

Basic information

LNCipedia transcript ID: MIR99AHG:129 
LNCipedia gene ID: MIR99AHG
RefSeq ID: NR_136548
Location (hg38): chr21:16588598-16610777
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4237 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136548.1
Alternative gene names: MIR99AHG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MIR99AHG:129 no no no no

Available literature

  1. Bailey (2015), Loss of estrogen-regulated microRNA expression increases HER2 signaling and is prognostic of poor outcome in luminal breast cancer., Cancer Res.
  2. Caudron-Herger (2015), Dissecting the nascent human transcriptome by analysing the RNA content of transcription factories., Nucleic Acids Res.
  3. Shih (2015), Non-Coding RNAs in Castration-Resistant Prostate Cancer: Regulation of Androgen Receptor Signaling and Cancer Metabolism., Int J Mol Sci
  4. Emmrich (2014), LincRNAs MONC and MIR100HG act as oncogenes in acute megakaryoblastic leukemia., Mol. Cancer
  5. Gardiner (2002), Annotation of human chromosome 21 for relevance to Down syndrome: gene structure and expression analysis., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 MIR99AHG:129
5.1 MIR99AHG:129
5.2 MIR99AHG:129