Transcript: MIR646HG:16

Basic information

LNCipedia transcript ID: MIR646HG:16 
LNCipedia gene ID: MIR646HG
Location (hg38): chr20:60138481-60653918
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3684 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT080647
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.3357 non-coding 
CPAT coding probability 18.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR646HG:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf197-3:22
4.0 MIR646HG:16
4.1 MIR646HG:16
5.0 MIR646HG:16
5.1 MIR646HG:16
5.2 MIR646HG:16