Transcript: MIR646HG:15

Basic information

LNCipedia transcript ID: MIR646HG:15 
LNCipedia gene ID: MIR646HG
Location (hg38): chr20:60138342-60181245
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 968 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT080646; FPKM1_group_19727_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.3357 non-coding 
CPAT coding probability 1.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR646HG:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf197-3:21
4.0 MIR646HG:15
4.1 MIR646HG:15
5.0 MIR646HG:15
5.1 MIR646HG:15
5.2 MIR646HG:15