Transcript: MIR583HG:40

Basic information

LNCipedia transcript ID: MIR583HG:40 
LNCipedia gene ID: MIR583HG
Location (hg38): chr5:96050123-96065245
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 15123 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250551.1|ENCT00000347533.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.6568 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR583HG:40 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CAST-4:18
5.0 lnc-CAST-4:18
5.1 MIR583HG:17
5.2 MIR583HG:40