Transcript: MIR583HG:30

Basic information

LNCipedia transcript ID: MIR583HG:30 
LNCipedia gene ID: MIR583HG
Ensembl Gene ID: ENSG00000251314
Ensembl Transcript ID: ENST00000502645
RefSeq ID: NR_130776
Location (hg38): chr5:95962001-96631085
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 473 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT147350; ENST00000502645.2; NR_130776.1
Alternative gene names: ENSG00000251314.2; CTD-2337A12.1; AC104123.1; LOC101929710


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.022 non-coding 
CPAT coding probability 8.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR583HG:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CAST-4:4
4.0 lnc-CAST-4:4
4.1 lnc-CAST-4:4
5.0 lnc-CAST-4:4
5.1 MIR583HG:6
5.2 MIR583HG:30