Transcript: MIR4435-2HG:39

Basic information

LNCipedia transcript ID: MIR4435-2HG:39 
LNCipedia gene ID: MIR4435-2HG
Ensembl Gene ID: ENSG00000285016
Ensembl Transcript ID: ENST00000645914
Location (hg38): chr2:111593594-111631040
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 585 bp
Exons: 5
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645914.1
Alternative gene names: ENSG00000285016.1; AC017002.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -110.8886 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR4435-2HG:39 yes no no no

Available literature

  1. Kotzin (2016), The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan., Nature
  2. Yang (2015), A novel long noncoding RNA AK001796 acts as an oncogene and is involved in cell growth inhibition by resveratrol in lung cancer., Toxicol. Appl. Pharmacol.
  3. Kikuchi (2009), Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation., Nucleic Acids Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 MIR4435-2HG:39
5.1 MIR4435-2HG:39
5.2 MIR4435-2HG:39