Transcript: MIR3976HG:4

Basic information

LNCipedia transcript ID: MIR3976HG:4 
LNCipedia gene ID: MIR3976HG
Location (hg38): chr18:5747142-5750909
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 357 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026260; NONHSAT057089
Alternative gene names: XLOC_012616; linc-ARHGAP28-4; LINC01469


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -270.1269 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3976HG:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AP001496.1-2:3
3.1 lnc-AP001496.1-8:2
4.0 MIR3976HG:4
4.1 MIR3976HG:4
5.0 MIR3976HG:4
5.1 MIR3976HG:4
5.2 MIR3976HG:4