Transcript: MIR3945HG:5

Basic information

LNCipedia transcript ID: MIR3945HG:5 
LNCipedia gene ID: MIR3945HG
RefSeq ID: NR_037867
Location (hg38): chr4:184843296-184847046
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3390 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT099566; NR_037867; NR_037867.1
Alternative gene names: ; MIR3945HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.5692 non-coding 
CPAT coding probability 3.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3945HG:5 no no no no

Available literature

  1. Zhou (2015), A potential signature of eight long non-coding RNAs predicts survival in patients with non-small cell lung cancer., J Transl Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACSL1-1:5
4.0 MIR3945HG:5
4.1 MIR3945HG:5
5.0 MIR3945HG:5
5.1 MIR3945HG:5
5.2 MIR3945HG:5