Transcript: MIR3150BHG:5

Basic information

LNCipedia transcript ID: MIR3150BHG:5 
HGNC Gene Symbol: MIR3150BHG    
HGNC Full Gene Name: MIR3150B host gene
Ensembl Gene ID: ENSG00000245080
Ensembl Transcript ID: ENST00000517864
Location (hg38): chr8:95068924-95073182
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 566 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000517864; ENST00000517864.1; RP11-320N21.1-003; OTTHUMT00000379663.2; NONHSAT127819
Alternative gene names: ENSG00000245080; RP11-320N21.1; ENSG00000245080.3; OTTHUMG00000164658.3; ENSG00000245080.4; MIR3150A; ENSG00000245080.5; ENSG00000245080.6; MIR3150B; ENSG00000245080.7; AC068189.1; MIR3150BHG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.649 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3150BHG:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TP53INP1-1:1
3.1 lnc-TP53INP1-1:1
4.0 lnc-TP53INP1-1:1
4.1 lnc-TP53INP1-1:1
5.0 lnc-TP53INP1-1:1
5.1 MIR3150BHG:2
5.2 MIR3150BHG:5